LICENSE
MANIFEST.in
README.md
setup.py
metaloci/VERSION
metaloci/__init__.py
metaloci/__main__.py
metaloci/mlo.py
metaloci.egg-info/PKG-INFO
metaloci.egg-info/SOURCES.txt
metaloci.egg-info/dependency_links.txt
metaloci.egg-info/entry_points.txt
metaloci.egg-info/requires.txt
metaloci.egg-info/top_level.txt
metaloci/__pycache__/__init__.cpython-310.pyc
metaloci/__pycache__/__init__.cpython-39.pyc
metaloci/__pycache__/__main__.cpython-39.pyc
metaloci/__pycache__/mlo.cpython-310.pyc
metaloci/__pycache__/mlo.cpython-39.pyc
metaloci/graph_layout/__init__.py
metaloci/graph_layout/kk.py
metaloci/graph_layout/__pycache__/__init__.cpython-39.pyc
metaloci/graph_layout/__pycache__/kk.cpython-39.pyc
metaloci/misc/__init__.py
metaloci/misc/misc.py
metaloci/misc/__pycache__/__init__.cpython-39.pyc
metaloci/misc/__pycache__/misc.cpython-39.pyc
metaloci/plot/__init__.py
metaloci/plot/plot.py
metaloci/plot/__pycache__/__init__.cpython-39.pyc
metaloci/plot/__pycache__/plot.cpython-39.pyc
metaloci/spatial_stats/__init__.py
metaloci/spatial_stats/lmi.py
metaloci/spatial_stats/__pycache__/__init__.cpython-39.pyc
metaloci/spatial_stats/__pycache__/lmi.cpython-39.pyc
metaloci/tests/__init__.py
metaloci/tests/test_tools.py
metaloci/tests/__pycache__/__init__.cpython-39.pyc
metaloci/tests/__pycache__/test_tools.cpython-39.pyc
metaloci/tests/data/aggregate.txt
metaloci/tests/data/gencode.vM35.annotation_chr19.gtf.gz
metaloci/tests/data/mm39_chrom_sizes.txt
metaloci/tests/data/regions_test.txt
metaloci/tests/data/signals_test.txt
metaloci/tests/data/hic/ICE_DM_5kb_eef0283c05_chr19.mcool
metaloci/tests/data/signal/DM_27me3-merged-sub137930236_chr19.bed
metaloci/tests/data/signal/DM_27me3-merged-sub137930236_chr19_header.bed
metaloci/tests/data/signal/DM_Arid1a-sub17717303_15052021_chr19.bed
metaloci/tests/data/signal/DM_Arid1a-sub17717303_15052021_chr19_header.bed
metaloci/tests/data/signal/mm39_organoid_ATAC_4000.bed
metaloci/tests/data/signal/mm39_organoid_ATAC_4000_chr19.bed
metaloci/tests/data/signal/multi_chr19.bed
metaloci/tools/__init__.py
metaloci/tools/figure.py
metaloci/tools/layout.py
metaloci/tools/ml.py
metaloci/tools/prep.py
metaloci/tools/__pycache__/__init__.cpython-39.pyc
metaloci/tools/__pycache__/figure.cpython-39.pyc
metaloci/tools/__pycache__/layout.cpython-39.pyc
metaloci/tools/__pycache__/ml.cpython-39.pyc
metaloci/tools/__pycache__/prep.cpython-39.pyc
metaloci/utility_scripts/__init__.py
metaloci/utility_scripts/bts.py
metaloci/utility_scripts/compressor.py
metaloci/utility_scripts/gene_selector.py
metaloci/utility_scripts/sniffer.py
metaloci/utility_scripts/__pycache__/__init__.cpython-39.pyc
metaloci/utility_scripts/__pycache__/bts.cpython-39.pyc
metaloci/utility_scripts/__pycache__/compressor.cpython-39.pyc
metaloci/utility_scripts/__pycache__/gene_selector.cpython-39.pyc
metaloci/utility_scripts/__pycache__/sniffer.cpython-39.pyc