Metadata-Version: 2.4
Name: melizalab-tools
Version: 2025.8.20
Summary: Meliza lab scripts and modules for auditory neurophysiology
Project-URL: Homepage, https://github.com/melizalab/melizalab-tools
Author-email: C Daniel Meliza <dan@meliza.org>
Maintainer-email: C Daniel Meliza <dan@meliza.org>
License: BSD 3-Clause License
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.10
Requires-Dist: appdirs>=1.4.4
Requires-Dist: arf>=2.7.1
Requires-Dist: ewave>=1.0.10
Requires-Dist: libtfr>=2.1.9
Requires-Dist: neurobank>=0.11.1
Requires-Dist: pandas>=2.3.1
Requires-Dist: pyyaml>=6.0.2
Requires-Dist: quickspikes>=2.0.6
Requires-Dist: samplerate>=0.2.1
Requires-Dist: scipy>=1.15.3
Requires-Dist: toelis>=2.1.4
Description-Content-Type: text/x-rst

dlab
----

A collection of python code and scripts used by the Meliza Lab.

To install: ``pip install melizalab-tools``

modules
~~~~~~~

-  ``dlab.pprox``: functions for working with
   `pprox <https://meliza.org/spec:2/pprox/>`__ objects, a data format
   for storing multi-trial point process data (e.g. spike times evoked
   by stimulus presentation).
-  ``dlab.neurobank``: some convenient wrappers for interacting with a
   `neurobank <https://github.com/melizalab/neurobank/>`__ repository and archives.
-  ``dlab.signal``:  signal processing functions

console scripts
~~~~~~~~~~~~~~~

-  ``group-kilo-spikes``: sort spike times output from
   `kilosort <https://github.com/MouseLand/Kilosort>`__ and
   `phy2 <https://github.com/cortex-lab/phy/>`__ into pprox files.
- ``get-songs``: extract segments from arf files, rescale, resample, save into
   wave files, and optionally deposit back into neurobank. Usually the first
   step in generating a stimulus set, keeps a nice provenance trail.

other stuff
~~~~~~~~~~~

