Metadata-Version: 2.1
Name: SRAdownload
Version: 1.1
Summary: downloads SRA short reads from either NCBI or EBI and converts them into fastq.gz files
Home-page: https://github.com/zheminzhou/SRAdownload
Author: Zhemin Zhou
Author-email: zhemin.zhou@warwick.ac.uk
License: UNKNOWN
Description: SRAdownload
        ===========
        Install it via PIP
        
        ::
        
          pip install --upgrade SRAdownload
        
        
        Usage: SRAdownload [OPTIONS] [RUN]...
        
          A simple tool that downloads SRA short reads by their accessions (RUN)
          from either NCBI or EBI and converts them into fastq.gz files. Version 1.0
        
          Try it with "SRAdownload SRR2223576 SRR2223582"
        
        Options:
          -f, --folder TEXT  Root folder for fetched short reads. Each SRA record will
                             be saved in a sub-folder. DEFAULT: current folder
        
          -s, --source TEXT  Sources for reads, change to EBI,NCBI if your connection
                             to EBI is faster. DEFAULT: NCBI,EBI
        
          -h, --help         Show this message and exit.
        
Keywords: bioinformatics,genomics,short reads,SRA
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Description-Content-Type: text/markdown
