<ttd>
	<tool status="external">
		<category>does not really matter</category>
		// multiple of these are allowed
		<type>Rscript_mzTab2tsv_PEP</type>
		#name# -- for internal only
		// multiple of these allowed (same # as 'types') - for external only
		<external>
				<text>
					<onstartup>Calling Rscript mzTab2tsv_PEP ...</onstartup>
					<onfail>Something went wrong. Is 'R' in your PATH?</onfail>
					<onfinish>Tool finished successfully.</onfinish>
				</text>
			<e_category>FileConversion</e_category>
			<cloptions>--vanilla "%1/mzTab2tsv_PEP.R" "%2" "%3"</cloptions>
			<path>Rscript</path>
			<mappings>
				<mapping id="1" cl="%%scriptpath" />
				<mapping id="2" cl="%%in" />
				<mapping id="3" cl="%%out" />
			</mappings>
			<ini_param>
				<ITEM name="scriptpath" value="." type="string" description="input script path, this should point to share/OpenMS/SCRIPTS of your OpenMS installation"/>
				<ITEM name="in" value="" type="input-file" description="tabular input data" required="true" advanced="false" supported_formats="*.tsv" />
				<ITEM name="out" value="" type="output-file" description="output tsv file" required="true" advanced="false" supported_formats="*.tsv" />
			</ini_param>
		</external>
	</tool>
</ttd>
