Metadata-Version: 2.1
Name: bmt-lite-1.8.0
Version: 2.1.1
Summary: A zero-dependency near-clone of common bmt capabilities
Home-page: https://github.com/patrickkwang/bmt-lite
Author: Patrick Wang
Author-email: patrick@covar.com
License: MIT
Description: # Biolink model toolkit - lite!
        
        _bmt-lite_ is a zero-dependency near-clone of a subset of [_bmt_](https://github.com/biolink/biolink-model-toolkit).
        It is backed by a pre-populated cache of input/output pairs for many of the more commonly used _bmt_ methods.
        
        _bmt_ alone occupies ~127 KB on disk, but with all of its dependencies it takes up ~36.2 MB. On the other hand, _bmt-lite-1.8.2_ is ~295 KB on disk, of which ~254 KB is the cached data. To initialize a Toolkit from _bmt_ takes ~2 seconds, while initializing a Toolkit from _bmt-lite_ takes ~2e-7 seconds. Because all of _bmt-lite_'s behavior is pre-cached, it does not require the internet at run time.
        
        |   | bmt | bmt-lite (-1.8.2) |
        |---|---|---|
        | size | 127 KB | 295 KB |
        | size w/ deps | 36.2 MB | 295 KB |
        | init time | 2 sec | 2e-7 sec |
        
        _* all measurements made on a typical laptop on a random Tuesday afternoon_
        
        Note: _bmt-lite_ does not implement all of the functionality of _bmt_. Feature requests (or pull requests?!) are welcome. In addition, the existing functionality may differ slightly; for example, _bmt-lite_'s element-name/id format conversions are known to differ for some special cases.
        
        # Installation
        
        You must install a specific "flavor" of bmt-lite corresponding to the Biolink model version that you want.
        Versions 1.7.0 - 2.2.0 are currently available.
        
        For example,
        ```bash
        pip install bmt-lite-1.8.2
        ```
        
        # Usage
        
        Use bmt-lite almost exactly like you would use bmt itself: https://github.com/biolink/biolink-model-toolkit#usage
        
        # Development
        
        ### Building
        
        ```bash
        pip install -rrequirements-build.txt
        ./build.sh
        ```
        
        ### Testing
        
        ```bash
        pip install -rrequirements-test.txt
        tox
        ```
        
        ### Publishing
        
        ```bash
        pip install twine
        twine upload dist/*
        ```
        
Platform: UNKNOWN
Requires-Python: >=3.7
Description-Content-Type: text/markdown
