circtools/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/circtools.py,sha256=g7ZHnJO_UZL7GKGbYShTIDVGB0UviZILJ2kpE5Rfs3I,66925
circtools/circ_module/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/circ_module/circ_template.py,sha256=J9z-E8GOrAAgKV7ADF-y-xBweYOn0MZdMCc1Wlo4Yps,3183
circtools/circtest/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/circtest/circtest.py,sha256=vr-1Ur2aESmnZI0LsJTzBPr_seSMGJWNZO1Jvk3-fjk,6214
circtools/conservation/FetchOrthologs.py,sha256=B69S8bQIN2xMyyM1iABCpMJqUVraEirixbmigts6m3c,2194
circtools/conservation/FetchRegionGeneSequence.py,sha256=u89S0sF2fXPbZfJ9sIsZ0OHt6mio7Q6_JbWT-N3gOvg,1024
circtools/conservation/LiftOver.py,sha256=wBFTlHIGw3g4L5_D-HY81XTNP8XIHoX1VSOcIogBgoA,12410
circtools/conservation/SequenceAlignment.py,sha256=8oP9bPeoC59oObCkhGMCDvXPQLgUH5TMYR-uGhx-hqE,5865
circtools/conservation/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/conservation/conservation.py,sha256=3aXA1J-qbZFijoEGX4d_RhfUov85BycwqRN-2w1l8Jg,25418
circtools/conservation/liftOver,sha256=Gy5sfcXF-Hef4DI7cWOmTvqSTk5d7A137lGHN1Le3vU,35022592
circtools/conservation/config/example.config,sha256=299te8EVNW3W5KYO3HyOcDv8PsosPjY9WD9maRnXuCA,365
circtools/contrib/circtest/.Rbuildignore,sha256=Sawa_qmqBqJUDkjpFC-JAMSSNVOPe06vov1VzUjrMl4,28
circtools/contrib/circtest/.gitignore,sha256=obnkpNyc3QwDolJtv37rDZW249RRydEdIUwm1NgU56U,569
circtools/contrib/circtest/DESCRIPTION,sha256=uwWmB5bmH8nuAXMR-f7M8fYlAhEFiCwSb3OD5Dzlcd8,478
circtools/contrib/circtest/NAMESPACE,sha256=bRrIkfIgQeXwTG1oLerdvPD1SAASrny1lnM1S0CLqCA,151
circtools/contrib/circtest/README.md,sha256=KHJ3YpoIewBECI3c5yDVsGHpyhOE9rfvAGx1moDQUXI,6938
circtools/contrib/circtest/R/Circ.filter.R,sha256=V9-8JmYBiXv2eFWXPrAGIqeQaN47A7ExsNwv5N2UMSA,2500
circtools/contrib/circtest/R/Circ.linePlot.R,sha256=ng-luriBEF-qlEpFnK4Xb3ifZPr4ClTaHjhRp-A2Rsw,6106
circtools/contrib/circtest/R/Circ.ratioplot.R,sha256=_c0Jn0HodColvz2mqOOWIL4VfWCZc_4Pnt8pYl7_tN0,7248
circtools/contrib/circtest/R/Circ.test.R,sha256=m8TpJNJx1AExt6-5Nwzi00YQ_vvwcUQza35muvC9yrQ,5286
circtools/contrib/circtest/R/HostGeneCount.R,sha256=ZqNpNgM71brxyGTtCpK5TovFo_CPMDfmrxp8m_rgtOk,4428
circtools/contrib/circtest/R/documentData.R,sha256=VMYWifCPbp_g7uhTO1l-kaQJcm_BMiGVayo_AXgCHsQ,4296
circtools/contrib/circtest/R/summarySE.R,sha256=IRIYGfYDRvoiGRD31mWVXhLLbDAVJY2OKxWqWyPjtd4,1696
circtools/contrib/circtest/data/Circ.rda,sha256=jTVB2m4nF8wkF_8CXaZ8L1nE6Kmayy5i40hI8TYXmeE,3611
circtools/contrib/circtest/data/Coordinates.rda,sha256=k8qg4Zm9wKERYMTQbjK2i4wuoX8xzq1f0WQuU7ksU5Q,3031
circtools/contrib/circtest/data/Linear.rda,sha256=iQ4pBWEXoD16A6B15t13AF1UFNb6h7StL_CePZ0Q4YU,4386
circtools/contrib/circtest/man/Circ.Rd,sha256=U4uUSd1q-7_chlp1guA7rdy_NJ8mNZNMW-N_1m43R4Y,1972
circtools/contrib/circtest/man/Circ.filter.Rd,sha256=uIX0ot3ZLDK122qX03tuiPxen3ZdV1KEAntyBgx3Plw,1442
circtools/contrib/circtest/man/Circ.lineplot.Rd,sha256=nD91qpwQqYUxwhW1I4js1EYUgbb8j-pWqiKQ4XkS_rE,1925
circtools/contrib/circtest/man/Circ.ratioplot.Rd,sha256=jOj_ElKDT6NRfK-QMr2BdjJi0xMjXtwPhBrOzC6mY_c,1813
circtools/contrib/circtest/man/Circ.test.Rd,sha256=jP-q89m6wxmgVJc72TAnuATO3CSuQRvExUJoFSYdLEs,1427
circtools/contrib/circtest/man/Coordinates.Rd,sha256=FeMPVXB4xPAkJH60N8hs6440dGFj3jvsErj8BojSihk,549
circtools/contrib/circtest/man/HostGeneCount.Rd,sha256=Xv4SQQ7VrPJzNH_WSFCiicALRrhSTXKvvSy_LkcQuLc,903
circtools/contrib/circtest/man/Linear.Rd,sha256=0NdErULLStBX_7gpvWIL3bc7vLYGQi-GrbqE7_X48e4,1958
circtools/contrib/circtest/man/read_one_scanBam.Rd,sha256=XZVNrJZkxcT5SdK085qgG_pI3vHHWMcAUAwgcD2NIfg,717
circtools/contrib/circtest/man/read_scanBam.Rd,sha256=MXGxRVsfSZg-ogafkhj7b96RXD3m3utcV7Z1JZeAxFw,762
circtools/contrib/circtest/man/summarySE.Rd,sha256=1hw_J1Bgj1T9bq3NP4WbBBrd3TwayQr96EHXxXmVO0E,266
circtools/contrib/liftOver/AMD64/linux/liftOver,sha256=t-KV8-Bhhqs0yJsqvcWOmOVaxaoVjbTfHGKSsCOicr0,24769384
circtools/contrib/liftOver/AMD64/mac/liftOver,sha256=lEWr7HL1WAC7_3YaEmeaewyZ8QxY2_xraton3BzHxzI,10839616
circtools/contrib/liftOver/ARM64/mac/liftOver,sha256=A2Q_8iabeNWZRVDdT7Cib5Bi1i7TT4cEPD38I7yWLXU,10175704
circtools/contrib/mafft/AMD64/linux/mafft.bat,sha256=9eUWJwxm57L9cevLLsw_VqW2OlP4iKj0ESAw7CcsUnU,284
circtools/contrib/mafft/AMD64/linux/mafftdir/bin/mafft,sha256=DBEvWL-7CH9CTHzypPTga_vgjbPAFwojryi3AXkjmFI,109783
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/addsingle,sha256=7GiIJNmD1XK9qo2RpFi6qFrB-89Dt8HoM0xL3Vr2WRA,1315696
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/contrafoldwrap,sha256=GOxJQklEVbWgf11e1e_S_WFKwlYNQh-Nf-7unll6Mgw,926072
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/countlen,sha256=fFv0BvQjhf-JsktfnyheCWtXxAQVfpgk3_IgI4-QhLg,625368
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dash_alignments,sha256=VQqLEq4CM5v-HoPDo6Ad-PACn776s_GfGbyKMBHu4BI,139470
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dash_client,sha256=ey8aj4uSJ2n--qA5mwV6og6T2lzs4Esx4Ta3dQk8b5s,4232576
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dash_sequences.fa,sha256=W52ptTDnxt8jY_VHFaTA0EKrg5vEjINbZhCyYbpzeUk,27687
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/disttbfast,sha256=MQAH5uSAGCGHA3vZIiBQPvbk9foPBWr8nkAPbq_LJoM,1339248
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dndblast,sha256=xk4f-rRxZ4ABmi8CZcgFpDFVlStB5B96XKOvJehty18,937744
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dndfast7,sha256=rLIDDWTbAWqz_1RRDt1OUg8dyp2Efl47hHiJELUZ9JA,936976
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dndpre,sha256=wmgc-jS_WM6VsZdRuEfCmb1jy4edKIGLvd-tJGo8BIA,924048
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/dvtditr,sha256=iMSDOVL0bFlGjR_9vGrIQla-x2Rf-bm79YTHyFUDSb0,1271664
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/f2cl,sha256=NBven2H4o4xsGg_oW7bq8FppI2gJocw1SpebLIt2N8I,735344
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/filter,sha256=GlDeQPYGSPjjYnQmF2f-SZrp2ZDyUvf9ytCgkzJmEZo,862672
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/getlag,sha256=ORYq5fAgpD97wa3SBdlIi1WsTcIv-dFIPZpfDkQAEFg,1200976
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/hat3,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/hex2maffttext,sha256=pYF8ANAsOItJsPjoKpXaMWtoqkLY-QGg32Wzy3UNXmQ,542776
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mafft-distance,sha256=IHnYWdVcgflTGK-MFhqIa68OoW5gMXOT0DdpG0JBY9Q,936344
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mafft-homologs.1,sha256=r4FJgnZUotsU3g9BBKWGgVSK8mG0j6HHSHCqCMhwqEc,4550
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mafft-profile,sha256=inT2PqNyjX86RRSj1TP18NAsgB_YzxzfgOe3m6p6iUM,1199856
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mafft.1,sha256=MZswv5zXoc0eZISJULhBliaMggj69fyQ0OnV_-n6aHU,14771
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mafftash_premafft.pl,sha256=BZS6Bk4GrQtkepknvHNUHt2F_RjAmmXHpchJsxi5Pvk,10475
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/maffttext2hex,sha256=TO00_trHzoTUO5PJPTYJfCRX7s_rCIgaZVcoamzcrxk,542776
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/makedirectionlist,sha256=5uDJSJ9vEdoVZ7sjpn9AO0FceXCkp80cxgO1razsgpU,1223416
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/mccaskillwrap,sha256=z_2hH-0rSYQbkbezs97F1lPUcL8AUOSzmObCv6KFmWM,928560
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/multi2hat3s,sha256=crLjRQX00xeTmVPoNi2jb0EjnV6vQV3IPE83x2nd02s,984240
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/nodepair,sha256=XLAz8C3ke9tBnv2avVFbeFrecNOxUFgERuhsURk4GtY,1264016
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/pairash,sha256=bVPuK2NcIyB-3RZoph2KReGBN7nByFEnuMYWckd4Y80,1213072
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/pairlocalalign,sha256=C_Txo8S-lfeg5-CB2Lg-vygxDHcow0gWOpg6FFCmCtc,1239448
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/regtable2seq,sha256=nfx-ral3w8xcVt3noTOHjM9iZUkbaWr_0YqUP12ohGo,866768
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/replaceu,sha256=GqgPmaS7HrcpRJed819CH96bAX1Y233kXpxg4uldOLg,866768
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/restoreu,sha256=lfezArKQUeNzDpn9isovVLnG8QuV-maM57rPJgrhzkQ,866768
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/score,sha256=Bixn8IZ8CJa5izaMLYhrMbWNRSuzzs2nCPVXCpedToE,924040
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/seekquencer_premafft.pl,sha256=v-L0zVecNzSsmkl5yaG1d774mT9SQsNCAZ3yxJDYL9M,15541
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/seq2regtable,sha256=TPtY3HL6XCaWvMrAZjMyrk8FbijWX7ZQAi0tjwXNh6Q,625496
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/setcore,sha256=HCFsOhdMf_TbZmTnq4TiyqG01s6unLGdZjqtoQI_7Tg,1199888
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/setdirection,sha256=Vq_UGlX0sGvJQg_V_99lMM0RqtYeP7HevKuaZZWH1gg,866768
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/sextet5,sha256=JHrJQypse-kb8Ou_dyRTXo4-o_qbreXqO3oyDp6P6As,933392
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/splittbfast,sha256=gfm3CAQpFOKo4C8jlm9Eex9hse6S9gAjdkOIUlfdtbE,1227152
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/tbfast,sha256=aa8XD6HQzmuVXu3TiPt8Hb1fR9IT6uG_LMPC9NOflSU,1309776
circtools/contrib/mafft/AMD64/linux/mafftdir/libexec/version,sha256=1XW_CDHr0OwDJtXnqltlMiboPE0E4qb2gQOQ0zan3uY,538904
circtools/contrib/mafft/AMD64/mac/in,sha256=vEYTx8CFH0FhHCf1dAJiaL7-iH-MQKWI-nibnDmHgJM,33
circtools/contrib/mafft/AMD64/mac/mafft.bat,sha256=J6aBMoF0sqP6ILH2YgaJP7pkzRr1mwdYcf77MUskU40,228
circtools/contrib/mafft/AMD64/mac/mafftdir/bin/mafft,sha256=pAN3z6jqp1xMqnMwoQHXt9T--FSdlGDNLdJv2Ql0lno,109789
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/addsingle,sha256=uWjHh1v1A9QYnU7bYYwSAIFY7CUMj05AW5w3FRXUZFw,1668400
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/contrafoldwrap,sha256=qmwB9vPwD9XrqdRi5U2lOw6hAIvd2ss_xhGQ9vp2Ohg,897920
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/countlen,sha256=HsH8wTQTEKXvUFNvWWg2uvMZduNO7TvnF1KgewvdRRA,369056
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/dash_client,sha256=pW7-H9arWW1OA8P6GMzBJmURwc7saCWjK9ncp-Kumjs,13317456
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/disttbfast,sha256=5HUHkOy0-zm4u4Htq_T3nawVGnVMVXdOhwSS0NFHzXM,1701632
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/dndblast,sha256=uQPYU5s67McIdrs_TrYINegALCqKij8EFfH4-p9Kep0,932864
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/dndfast7,sha256=cH9x13zDP1TESGchFFnmduNNk_nt7Mj_paLq1e4zAhw,932832
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/dndpre,sha256=RvLj6ifO7omEhNXUzs2C5CN6l2HYRUALi7PY1TQSQx0,897648
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/dvtditr,sha256=4elkI8qFHIODIIBk3eBX5pzHEeJZDg_uRqOvQy3CdzI,1719568
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/f2cl,sha256=VSKVtaLOGRMCVmvXvVyfb6hP0zzPSyupDm3YYMeSuLM,502512
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/filter,sha256=OPQLGAIdVkka3Gb14tnxu-v2TLuKPoXaJJI1k1n74E0,781280
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/getlag,sha256=JW5WDNjD0_jOi1Jc70MRfe508qBazGffS8bRVPiPRJ0,1550816
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/hex2maffttext,sha256=kYV5v7Pqep7ZXnILn_bKGUIgHK4Vcfb4UplkuFCXTcc,151088
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mafft-distance,sha256=7nhVKrlO1CAoG6_AVgF8L1cu0zS5iugvxF62EHFVtS8,949504
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mafft-homologs.1,sha256=r4FJgnZUotsU3g9BBKWGgVSK8mG0j6HHSHCqCMhwqEc,4550
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mafft-profile,sha256=A-yryYZZxNPCQaZO2n6dtBWc8QASSgk4Q1l9KzfgyCE,1550784
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mafft.1,sha256=MZswv5zXoc0eZISJULhBliaMggj69fyQ0OnV_-n6aHU,14771
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mafftash_premafft.pl,sha256=BZS6Bk4GrQtkepknvHNUHt2F_RjAmmXHpchJsxi5Pvk,10475
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/maffttext2hex,sha256=hNMiokaCPeGA2oR5qj4-Nr9yuhVSPauPC5v5UCiBLTE,151136
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/makedirectionlist,sha256=-XkRfXIZlE8bPFAeRR-Rp_d0IgjqaNES4kvwylfHZN4,1618512
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/mccaskillwrap,sha256=tCYLZZtDfEiBrMXZmAhRcLgDfFbzwypUC7Cwmq6Ifss,897952
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/multi2hat3s,sha256=q0m0ShJxWa7l_QRzjiBJyIbIwwrgnCgTTfj517d6AkI,968832
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/nodepair,sha256=j0l-CmxCKhnJu8dew7a4uY3oYH4ZZoiphJ_ft1h7y0o,1701936
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/pairash,sha256=or-t3uFWw534eIWHRXgX3Y362I7WWqJjLi9QjDU64N8,1583376
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/pairlocalalign,sha256=v4HQwH2ujv-OoP2n0A5Lmq9c3DQcUUKlMGJoAoORWAs,1632864
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/regtable2seq,sha256=1neDmDAIz_Yoc0VhnG8eh-nXsc8RBLu_jj4vKrVoH_Y,781424
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/replaceu,sha256=0zvAzquiSi1OA_KxXuNPWD-20bo5v5f_1EcNGeeQb9k,781376
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/restoreu,sha256=Hs-yUrw0rKz8FpgsHJASteGBLTCZwYgyCb0CuKdzvjo,781360
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/score,sha256=mRrDhGxv7osD4WkLhvLwOKCXJ1zge5G0An7aBe1jkpI,897616
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/seekquencer_premafft.pl,sha256=v-L0zVecNzSsmkl5yaG1d774mT9SQsNCAZ3yxJDYL9M,15541
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/seq2regtable,sha256=dCYlwfmdhYnu8u46VGFbFN0YfevN9h7Efh8MWXF1vk0,369136
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/setcore,sha256=Y2I88c0ewbKuzcqriWAzobUUUSk-IEkGreozJdB5n1M,1550592
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/setdirection,sha256=4Y8byfGdN9-FHxbizPtHUcxkLCivKt2_zGDmuAir8cY,781392
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/sextet5,sha256=zaxFBUnnKNkREUl-jsHGApyZVVSZyRS3_Zl3xGPx-EE,949408
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/splittbfast,sha256=2UZmOhIxo8edamH48-qb_h_1U8AmZtfAwpypGT6zOYE,1601856
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/tbfast,sha256=YF1rVaWGrv9jYdN3HkT_2V7c2FYDWhvVtX6qnOCs3LQ,1818464
circtools/contrib/mafft/AMD64/mac/mafftdir/libexec/version,sha256=b4dUdVMnYpOab8np1HP9-3BX9zqwsqHyksivWXovMVA,150624
circtools/contrib/primex/.Rbuildignore,sha256=M3T6eOYvCBDMYeIHyqglHTJB607najyrWMK2FPuWAHQ,112
circtools/contrib/primex/CONDUCT.md,sha256=4-AXKGmA-A29vfi3by6oU_qWDFVvE2u48dhjD71kxoU,1387
circtools/contrib/primex/DESCRIPTION,sha256=pXv4L4YwJkGjQ-1RFZGEAbfnsyni6hK8P6DOfoGlna4,846
circtools/contrib/primex/LICENSE,sha256=WF4l749ZRqUr8q7WjVvs_Di-lKhmOqAcGzHYiqV_HeM,34904
circtools/contrib/primex/NAMESPACE,sha256=khV-gAXTXVWtemRSLaC-GZ7wCA_-7YrH-oITQDzBjQ0,410
circtools/contrib/primex/NEWS.md,sha256=UtREGJTzex1lA282u9BVuCgAB42KQ6cT-_xSC3TUk-M,19
circtools/contrib/primex/README.Rmd,sha256=uxST7JlB1z_5mi63WqnVB-d1s3HBploZ6RU0P_AdkVM,1596
circtools/contrib/primex/README.md,sha256=tfff5f7mdU1c4uU7ZUMR0xUeS_2R4VZzcs330m_VWJA,3215
circtools/contrib/primex/_pkgdown.yml,sha256=9n9P5FE7E0usEDahdiv6G4eFd4N_YSPNoGW5n8WIu1g,43
circtools/contrib/primex/R/data.R,sha256=9pZA9w4dCrb5-uQGlD9vm0O_AAmaYxqpI_2I_afW5L4,143
circtools/contrib/primex/R/design.R,sha256=U5sN0AFqfhvpegAzBZdCZr4HljMcPpG2G4bhHSreWJI,8516
circtools/contrib/primex/R/plotting.R,sha256=W9RfrSXzU3N2VQCzzDGnD21uKwT_2WdZGFgu_P6p_9o,3590
circtools/contrib/primex/R/select.R,sha256=P5VFFHtpQf2bBQ5SBbLNu-s0jk-a2fi4OJwCBjBCkhI,3535
circtools/contrib/primex/R/settings.R,sha256=tim_RawWsyenedBSV7DvO3N7eUZ1Kunt_rVh-wYBZRY,1888
circtools/contrib/primex/R/transform.R,sha256=abbBf7BMvYydo7QTstwf8E6A7rnt1l7XAWGxNWv7di0,2708
circtools/contrib/primex/R/utils.R,sha256=RDWPZKhV17piT_zE5Lps1OVJXlgGXxHF4H9JKKhxZNg,442
circtools/contrib/primex/docs/LICENSE.html,sha256=hTeqcBAhZIk3QfiX03K89T8wWSIr9UrutRBKxH-EQD0,38348
circtools/contrib/primex/docs/authors.html,sha256=qUElzhpe5qoeKfrZZgKUbROZo9mbeF8t6FYqUvYE_0w,3492
circtools/contrib/primex/docs/index.html,sha256=OYs7xXxPGZjKDZw2-EkEAZBG1ks7Cx89860CNas2Les,9664
circtools/contrib/primex/docs/jquery.sticky-kit.min.js,sha256=joIw8tHm4jDWP1vTCR6gkuuNH0R7X2yExbd2z09Qpl0,2798
circtools/contrib/primex/docs/link.svg,sha256=8UA9PcYFFCHfWyWs_5DCHrmQQYSZV6_Z4pCPZvNNHuY,810
circtools/contrib/primex/docs/pkgdown.css,sha256=PPL13EeUJOwHEnI-ZZ4r9AY3GQwG2TX0NNLgxdNj43U,2828
circtools/contrib/primex/docs/pkgdown.js,sha256=MyvbefbW82sdQtXOI_DO_fOPrvoZmisvJwF1k3K4Hjo,1085
circtools/contrib/primex/docs/articles/Usage.html,sha256=YKYTQvuZAD70dOxDcSsj-6RngqSQ8SXzRDicP5nMszQ,26375
circtools/contrib/primex/docs/articles/index.html,sha256=Tp7vvhl2Kw8Bwmgm_ZGNPmNujbsCfr1IVQXh-uHSsfM,3572
circtools/contrib/primex/docs/articles/Usage_files/figure-html/unnamed-chunk-10-1.png,sha256=PvUMgAJUycR1zuyAgS8JKXoUIwZ5x2ExMqLo7aS5Xtg,160986
circtools/contrib/primex/docs/articles/Usage_files/figure-html/unnamed-chunk-7-1.png,sha256=xaukEP6Hn8FWipylyekfj6ojRKunYZxEdqVNquobiiE,119338
circtools/contrib/primex/docs/news/index.html,sha256=wvPopGjICOgvEq2tsWXnqiei23PHu0UUriJM0F23lVo,3803
circtools/contrib/primex/docs/reference/addSeq.html,sha256=DBtzynYkHkVa2WhtDLCeCRAluVIv8khXVzENcRM97Fk,4619
circtools/contrib/primex/docs/reference/bcl6exons.html,sha256=JTBJ8mEcoU8DfouUwYXOVAX7P00_FpTdRRtOWuBej4Q,7074
circtools/contrib/primex/docs/reference/design.html,sha256=bLabaOrXZtZJGLF1OrQj3MYUg86GbOq7ZSqeRFd193U,9876
circtools/contrib/primex/docs/reference/diagnose.html,sha256=N9pq0fxEuzfqw8RDZM_vTzzCZO_d4AS7DmAimlVE7yk,5976
circtools/contrib/primex/docs/reference/extractExonPairs.html,sha256=FrEJdQrGVQjJd-bqbRZl712Qs1LTY9E0QRC5gHdME3E,4262
circtools/contrib/primex/docs/reference/index.html,sha256=4r5E8m2U5LqLUAgYlG_E78xPbrhV5ipxpiXnNmIQo8g,7328
circtools/contrib/primex/docs/reference/p3Settings.html,sha256=nI_H2A5JUBsFZsNyrh1PMjHa8-7cZJpLz-1DZF5i-kY,4606
circtools/contrib/primex/docs/reference/p3Version.html,sha256=J7DLke2nrcfvKHxWtRslvkcq8ANYlsw-6qLBjUBkCdE,3684
circtools/contrib/primex/docs/reference/plotSegments.html,sha256=cpi5aT2LO8o2Uzc_dGla6P9iCyICZArj0s-Xapgdfbw,4088
circtools/contrib/primex/docs/reference/primerSize.html,sha256=8jG-M-7l2B0aHU29Ekr8i4wR_SGmJZ850PZJgs-a73E,11416
circtools/contrib/primex/docs/reference/primerTm.html,sha256=mLNK_hIU8lsypc269bEhvDPEZXdHNxbb0FYNW79XAx8,11461
circtools/contrib/primex/docs/reference/primersToList.html,sha256=LQxKDCdHzaK-D3Q1OR4sfujU8kwEe5zgKma_Nx28TRU,4391
circtools/contrib/primex/docs/reference/productSize.html,sha256=FzYhSOSV8jSFBbZRNupkLJA-0NIpNXTXiyr-nc2iF2I,10879
circtools/contrib/primex/docs/reference/reexports.html,sha256=k1xQbcH1TBLdxKN75onl4Ts5BPNHWyR3JPI_B__lyGM,3819
circtools/contrib/primex/docs/reference/runPrimer3.html,sha256=pckm_VvsUXo-Y17G6wYpQcCrHi8DgJA8Rd-_Vbf9bhs,4797
circtools/contrib/primex/docs/reference/selectPairs.html,sha256=R18wcNPTLMEfPYqmre3CwUfi7y0wSRER5_oocaxgki0,4613
circtools/contrib/primex/docs/reference/seqSettings.html,sha256=tMZ63inLcCTnfWsgr3G1G3B4zjeWboj41Ph2g3_HzIM,5918
circtools/contrib/primex/docs/reference/toGRanges.html,sha256=0pdkzA81dBV0IKAMzDCsWZ6ZHZTU4o4gc5N2JH2jVBE,4439
circtools/contrib/primex/inst/primer3/primer3_core_Darwin_64,sha256=ctfgNMYMs8ORHBeaKRknEToxsDKWNN0LInT17fzMQRc,312896
circtools/contrib/primex/inst/primer3/primer3_core_Darwin_arm64,sha256=PEvY93C4uq1WggCszAe88Y70UpYu8839bt09Sjuid6c,205792
circtools/contrib/primex/inst/primer3/primer3_core_Linux_32,sha256=kDd7Cv2sWaKiDU0sSWmfWYfY7jb6jXjpCVQffpQVCQ0,239308
circtools/contrib/primex/inst/primer3/primer3_core_Linux_64,sha256=Ee5Lro8vVn9aOlQTLjui3AjTAZ50tznpAI2VMXGXGls,994360
circtools/contrib/primex/inst/primer3/primer3_v1_1_4_default_settings.txt,sha256=i4Dtc1hu7aibWK0RQWNedEayjihuRNrVlM-E7PRCMTk,3331
circtools/contrib/primex/inst/primer3/primer3_config/dangle.dh,sha256=yI8J3FvoKaEwzLsA8ULk_4kllBE1UmKRF5nQvgVx1Ko,373
circtools/contrib/primex/inst/primer3/primer3_config/dangle.ds,sha256=FnxCNxTQ01DPuN9UOadiHA40Azsfa4fBy1h2DXW9tSk,548
circtools/contrib/primex/inst/primer3/primer3_config/loops.dh,sha256=LSa3TK-OgOzlC2Way0vVR4EurVFD_7NTOEKGNzaKMIc,441
circtools/contrib/primex/inst/primer3/primer3_config/loops.ds,sha256=aLZ0N-t1SFIxq4eS5YsefKSIuB1GQLYdQPDRQCKR2pA,692
circtools/contrib/primex/inst/primer3/primer3_config/stack.dh,sha256=xzBd3sLGkJkDWOIH9aa-sRgoOnTOcRpKpo-Jt4j6fCc,1057
circtools/contrib/primex/inst/primer3/primer3_config/stack.ds,sha256=Te-IvuIXA5eEWDFZpp6lDKtOnqW4ITL3k439KGbQUk4,1056
circtools/contrib/primex/inst/primer3/primer3_config/stackmm.dh,sha256=ieEGnSAgnxoMTD3fibrRmvFn3cND5FQj850jICbQZNo,1144
circtools/contrib/primex/inst/primer3/primer3_config/stackmm.ds,sha256=e6KwZptb9vTHjqJUP40591-dWjQp4c8m6vRvcLa7JwQ,1109
circtools/contrib/primex/inst/primer3/primer3_config/tetraloop.dh,sha256=pLnhyhAV-JJU-tXLY9n_zebplmGO4afUF-4DKhZhP08,913
circtools/contrib/primex/inst/primer3/primer3_config/tetraloop.ds,sha256=NvGykn8vq7xxNam9_pxBXvy_EJUcaAqSuqMx58tAjrw,824
circtools/contrib/primex/inst/primer3/primer3_config/triloop.dh,sha256=caoBbYyUNx5xXbzBYfaISmJD0MBQkyv63ERhaK7MPCo,192
circtools/contrib/primex/inst/primer3/primer3_config/triloop.ds,sha256=EX7tAl-9UPBUMIP1vS207fm1TfdI9qG1fKonHMmrQJ4,128
circtools/contrib/primex/inst/primer3/primer3_config/tstack.dh,sha256=EoIVMsRAi_EvgbT6PetiRSkmUGkCySUTS3L7PN61xc8,890
circtools/contrib/primex/inst/primer3/primer3_config/tstack2.dh,sha256=NfpKcIGME71LOu6kAyI2jLo68ZGS3O-S0o0X-IFDTug,950
circtools/contrib/primex/inst/primer3/primer3_config/tstack2.ds,sha256=w-G26AkkwNR-nY86uSj2ZaiPmT1EAZ4M6-pyYS56YDQ,1184
circtools/contrib/primex/inst/primer3/primer3_config/tstack_tm_inf.ds,sha256=GBwxdbpXDEM856NFBDADJZpRD1lgtBvrHJa6c2WOYLo,1152
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/dangle_i.dh,sha256=maRK6vrQ3LIY4f9X_7f9lwsKpSkBBvtJiD0pxF5QrL8,994
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/dangle_i.ds,sha256=vSXafOcPLdgIyjemYDVszFA3tZZsmEel4yP4nzri9WU,1017
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/loops_i.dh,sha256=HI1nDtBGDPa8Gz0k1FJU2dlKdX_9N9CZAgWkT_QhfLg,1856
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/loops_i.ds,sha256=5FxQxfWx4vkZhpdIuwYXabJwyI9TW3Q6HVmumBLVg60,699
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/stack_i.dh,sha256=TphNt556Sv3g7N-LJMbDDoGBZ_OQ8vM5pt5R-enHwzs,2667
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/stack_i.ds,sha256=J5AtwqOp07V6YxY4hmIXHYVTD6sqbL9EyeJPuoZfgko,2592
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/stackmm_i_mm.dh,sha256=3bXO2OIhhqVhjLK9QhseLgBcsWnUUuzXimune1MYkYM,2751
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/stackmm_i_mm.ds,sha256=JLij2bhl7h8UA2KZeL74_GVenvczXAe80unIpnujP58,2643
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tetraloop_i.dh,sha256=EmVPRwoApcf6hGW_SjyAMS2aPBf8o_w6dHDHfu_YCvs,815
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tetraloop_i.ds,sha256=bNwZOuWSg1sS0tuwc3pF5Ndf402yju-yyIJMIB_TQg0,873
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/triloop_i.dh,sha256=Kwt81vKv88gnqC1YDLLJKEkd5BMKbpgpEGCII2wW63I,194
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/triloop_i.ds,sha256=U3I7ZDp9TrojtxFO22tyyzQte8xYMow7qPcqgC_RC3Y,160
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack2_i.dh,sha256=DlkOKzIHwTZJ_KHyf0ivhEjoOgtBvdnGSVfq5e6jW3Q,2486
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack2_i.ds,sha256=KprsvuGsHV1EstkqeOaOCMIR7wCqNqG9UmK0Y3bM-Fs,2720
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack_i.dh,sha256=ZWGZ5pE2w2v1vZB9Nf0uAttVf1Nx9FEEdlDSJ96aX6M,2135
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack_i.ds,sha256=rzDnuN8d2mjEkyqomefpkLp1jeg2FH91QqpdTLdzt_g,2463
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack_tm_inf_i.dh,sha256=ZWGZ5pE2w2v1vZB9Nf0uAttVf1Nx9FEEdlDSJ96aX6M,2135
circtools/contrib/primex/inst/primer3/primer3_config/interpretations/tstack_tm_inf_i.ds,sha256=P2UKLX_3vZ1AjlHzOcmE7yOCtIfyJkf6eXacVoB8pIY,2494
circtools/contrib/primex/man/addSeq.Rd,sha256=Xnk4EjiHKGsWdgBx33c34FoqHrGtxlgsLWgZfULFCmI,600
circtools/contrib/primex/man/bcl6exons.Rd,sha256=3LgrTDOJmK2dheTMQu0_FZhTrWzEFB79o_Hk7gjSCNY,350
circtools/contrib/primex/man/design.Rd,sha256=WT3r1xbOJLNPItiPNyvy0g3FiY6ZfKwt-eaHyLM3cao,1163
circtools/contrib/primex/man/diagnose.Rd,sha256=WNb-2SpjdzZ6rapDhNFhbgXI-WebqXuq14-hotoksao,662
circtools/contrib/primex/man/extractExonPairs.Rd,sha256=tuaTvB_KTq8sKzEw6sGOEPCQHhie37k6c4JJqv3Rhwk,345
circtools/contrib/primex/man/p3Settings.Rd,sha256=MTUEz0G07mLaynBYW2pMk-GXQFlVjvhmfBq0jVAEUlQ,503
circtools/contrib/primex/man/p3Version.Rd,sha256=CfCOE39CoIyB-5UIwSJcB4HjL-mzSV1jhq_JgKD8j0c,207
circtools/contrib/primex/man/plotSegments.Rd,sha256=Xx06KafSAmjlbgKGalwJpjqxOllkUh3RLxwGIkQc5Z0,298
circtools/contrib/primex/man/primerSize.Rd,sha256=t19lDAv5qsamCwdJDc3GUQob5i_E0-abN2gJ3VfynDU,605
circtools/contrib/primex/man/primerTm.Rd,sha256=WRYOFKibVIj4Z2MKPQCTkHJByavDhSjgaz4T4vw2R1E,638
circtools/contrib/primex/man/primersToList.Rd,sha256=4tyXE9J6AP38s44qBPiVOAj8X9Ecw5BxBdlQAaBAhOg,435
circtools/contrib/primex/man/productSize.Rd,sha256=RMx8WqyCuVsQId6qahjZLTo-0Lf4Gy50LTljKVgyDQE,492
circtools/contrib/primex/man/reexports.Rd,sha256=Qn-TDPfweeHi-F8OfNyUGYDKMnzJ1efAs2VXVLokf2A,397
circtools/contrib/primex/man/runPrimer3.Rd,sha256=wGPRNTxgLV2zePi8-fPljnon82gbWz3-KXrcyPxdjNw,582
circtools/contrib/primex/man/selectPairs.Rd,sha256=9fzqTbZ4PZ82BTEKt1IdmyNS-4KwedyAi7MvmbVPJVI,528
circtools/contrib/primex/man/seqSettings.Rd,sha256=rIc7NfhIdXQJFA07ACDEu9yg0IN_U2kJpJOH6qFWZTw,1163
circtools/contrib/primex/man/toGRanges.Rd,sha256=hqawRdICKXohUFh68hKPqEOZAZPx7Kgtjz4Ez0C200Y,404
circtools/contrib/primex/vignettes/Usage.Rmd,sha256=DaHJt35oCdZPLvaUiBgDcDAwEsBKoNG31WFNHaZSGBg,6488
circtools/detect/Circ_nonCirc_Exon_Match.py,sha256=e6W8sxYxMQuPI7Tdd-WYPYCSF9KBAP65kkOs6qWFT0U,20587
circtools/detect/CombineCirctoolsCiriquant.py,sha256=kN8-WJIjYoRsAwweYOjw-YucKFLTdRSyjbwzooW9bA8,13906
circtools/detect/CombineCounts.py,sha256=4m3ZRR4qfTe_Bg6qdDpCfYH-fsSujsdyW98-DcrADek,7245
circtools/detect/IntervalTree.py,sha256=2HbHQ46TaOjPW962vJZfJdNMKX62kCh7B4eHm2VgUr0,5230
circtools/detect/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/detect/circAnnotate.py,sha256=nTCg14RVHZHZuXsN6olaSYa_KUKLHuRMbWqd9AT2MFw,8673
circtools/detect/circFilter.py,sha256=odIKWzmFNHXkU5wQ7PxeMI5_3wr86wkkVEwPnx2Kgug,5913
circtools/detect/detect.py,sha256=gly5e5gAN_odNej8gKNMuabYQQMh74m1vzZ5qLyLsOM,41347
circtools/detect/findcircRNA.py,sha256=ZYw9KpFXAdZN0r1iL4iu9ntAVtSd7x5a11GwBFGYboE,11374
circtools/detect/fix2chimera.py,sha256=8QDPXppWaAG1h6gCAm7IJaXFW5287XX9uA9yYWSaLs8,5745
circtools/detect/genecount.py,sha256=pSc6ts4Uor91KN9SiAjBSEZd9Wrj-GkWvV30ZPJfH_I,13099
circtools/enrichment/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/enrichment/enrichment_check.py,sha256=21GmObZVfYkh1YkrAivqMZXV-jHahhMqlhEy6NghS98,56944
circtools/exon_usage/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/exon_usage/exon_usage.py,sha256=qVU1KG0RHcMHd8HQdXmQtxDYvXlhpL2T-Wgpz6tHtwk,5907
circtools/nanopore/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/nanopore/blat_nanopore_v6.0.sh,sha256=ydT5JnIzYW5qPATxFwz8kCYXm-MI2QDGCo1-r5A9KA4,18218
circtools/nanopore/blat_output_processing_v3.py,sha256=KE1ZyLXLc_a37KSTxWRXs8nDHLIqfmNgEYxgoRAMsV4,4467
circtools/nanopore/combine_annot_segments.py,sha256=r-KLDWqH1zTIoJw4xCzEl3yvp6XPkQ08ugEB9wU3AYY,2381
circtools/nanopore/flank2_combine.py,sha256=0CYRLP_4NR0x3N8MWQAwOa0zhW7swr9pbv-s3edu3hY,1496
circtools/nanopore/make_circRNAs_from_annot.txt.py,sha256=nbE860cL_wm5PCJcC_AfSA9133LJRpchhAko7_lSoME,3308
circtools/nanopore/nanopore.py,sha256=pEJDGsWjjd-SUaz-qiKEwJ0qpCdcbmoRN6tuZWDW6eY,22058
circtools/nanopore/novel_exons_and_alternative_usage_v8.0.sh,sha256=qIcAsbNSa0tcPHFV8ra9mUCH4KGnynuUjk1IFgeVzOI,20679
circtools/nanopore/psl2bed12.py,sha256=zSHfcPrkngzEkebLbESVdY42prKELqVU8JXB97fR_Rk,1819
circtools/nanopore/config/canFam6.yml,sha256=1ImRYTfT4JkNRBc9cV4_9k30aWnGYEY8agYk8Rt74bA,1134
circtools/nanopore/config/hg19.yml,sha256=gYLcYP6lHHk_n5ZBFShyFtxRZCSqn10Io8stapVWS3c,1728
circtools/nanopore/config/hg38.yml,sha256=0GMGpzMdazS_r_nKmJ4fr8Ay3NBmWWUAZMXybW6nGZY,1701
circtools/nanopore/config/mm10.yml,sha256=-hYe7Or0p_Pb2uSkAlBLzLo2ZSPkV1o4AyxVnUGD2Vw,1761
circtools/nanopore/config/mm9.yml,sha256=5PriVxtm2FpsYSBMd4eqDHgybJulgV7Gca8hUslyycI,1698
circtools/nanopore/config/rn6.yml,sha256=DojakyUB7P1Ax5qeMbBVVEbwv1D6zBUIv-voYGG7-rA,1102
circtools/nanopore/config/rn7.yml,sha256=MqeiVOnZnc6ZH_w9NIkXrOJEj19_S8_FavM4SYnyKYM,1102
circtools/nanopore/config/susScr11.yml,sha256=WfjAdqhQItnXlD4SQPNzwSk-W9FvWb2xPfyZ9AJhIlw,1142
circtools/padlock/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/padlock/padlock.py,sha256=238vGNb9bXzU0CAa6lKEuBJaMcOB4rwPjOHj1L15YDg,55348
circtools/primex/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/primex/primex.py,sha256=rwJmcGj58P-zUEGzF63bs6Sn0fCRzVrC90Hnoe-U-GE,28144
circtools/quickcheck/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/quickcheck/quickcheck.py,sha256=cb4SeSybP6QQp5VmAZ7Qw2CgS4KvtZHNrTWj0Uc8_aw,5440
circtools/reconstruct/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/reconstruct/detect_skipped_exons.py,sha256=Nh4FCLUsjYkd0MvMxvPsQwBDr4K1e5JnAtwpgt669sc,7926
circtools/reconstruct/detect_splicing_variants.py,sha256=vwqBM_DzmUrWtE8BwrxIefYa5h4-xYTpOHYiTW_A0fM,6747
circtools/reconstruct/extract_reads.py,sha256=ua83Ww76EJ62e_gzbWoIcvfykMAChWyFibzwpdIw6jo,5077
circtools/reconstruct/get_coverage_profile.py,sha256=_rNVz2HtdzxKUXUFRoTdS3tFAi79oudEd06_lBNF-0E,17026
circtools/reconstruct/get_mate_information.py,sha256=7nsfiwhlCzOb3w0am9C5WLJdAWjHs6MiWN8OvsetI7g,6805
circtools/reconstruct/get_readnames_from_DCC.py,sha256=yTgeh8bzjbDiWOuob2WVZaxmXh_f_eOO0kqHyWTRscI,4147
circtools/reconstruct/guided_denovo_circle_structure_parallel.py,sha256=kKGtwu6v-wwld9Ic6K5Dc9gi_INY9-KeYiv23XqbG7U,27401
circtools/reconstruct/permutate_motifs.py,sha256=vhLZUKJiClc3av7SGvSTXC4DxEZHUpyuyIM-2PoB3Rg,3771
circtools/reconstruct/proportion_of_fully_covered_circRNAs.py,sha256=mkCiC7bfZ3xNx_Yty-aWjY3kEgrNc6594Jf5kw1dR_w,2622
circtools/reconstruct/reconstruct.py,sha256=NU4obitli_NZdNnBMCKfk4BjeA7wpp02UNn80hg5Fm0,18178
circtools/reconstruct/replace_ids_with_names.py,sha256=onqLRzdoj-NBRZRPEy8SELu3K-1oX7WKOvLH471bzy0,2732
circtools/reconstruct/write_fasta_for_fimo.py,sha256=ieUJuaroBH4l_COmKs8Sp4RyRw32dt3Q35iL-gGa4dE,8423
circtools/scripts/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/scripts/bash_runner.py,sha256=usD4OWPngHpHJm9uV2e-2Lqgff8cJRlqRCPJhhB6xGY,1207
circtools/scripts/circtools_circtest_wrapper.R,sha256=f-9NfQjdagpVnxLdsjDp8xRg0He6luLLPn5_ZhDK8Fk,6910
circtools/scripts/circtools_enrich_visualization.R,sha256=EnWXuUmMDiN33z6VTWy6Cwf9Yr-3qIl49QTwF5dzKmc,22665
circtools/scripts/circtools_exon_wrapper.R,sha256=oSRW7YfL_ESKN0REeGOY1TLjpddiMa76KY2O1515SfY,21557
circtools/scripts/circtools_generate_flanking_introns.py,sha256=8Yr4cSWV6plnEc35UEV80AilGPaH2C4m43RRWcn7N-U,5214
circtools/scripts/circtools_generate_intron_gtf.sh,sha256=g4RCeqdqfLnpLogG9x0ned5XFesiUrjPdF2H6obwKxU,1595
circtools/scripts/circtools_merge_enrich_results.sh,sha256=ILpVd8DS4ax0iHNPgVyt6YfUvhl4Qv7DqpaPtQDEdcc,1019
circtools/scripts/circtools_padlockprobe_formatter.R,sha256=iVTfxxbV6DQ47E6Jvdou5ao9uNWL03GwA8PL_GdBSKk,12900
circtools/scripts/circtools_primex_formatter.R,sha256=npGxmkW4lWhlpPVshzUIFCkmBdKN1bb6tskAkNqiRSM,8398
circtools/scripts/circtools_primex_wrapper.R,sha256=C0CHTcMAb7KOECAP9wMyI-Lb4l1s7sN6t11QHDwz0wA,5071
circtools/scripts/circtools_quickcheck_wrapper.R,sha256=fRr-f4uYM5rwkhjwAeDSNvm8NjC1iN0G9W1JSKwKFxM,15182
circtools/scripts/circtools_reconstruct_coverage_graph.R,sha256=g3HSfls0UI0rkqWZDT2XazZtSOnq03LJgn4roWCLrr0,1488
circtools/scripts/circtools_reconstruct_summarized_coverage_profiles.R,sha256=h5lw2x3YvWT5E9mRDpqMrJIIeyQyI61_8aBPqXSN-Zw,8495
circtools/scripts/circtools_reconstruct_summary_graphs.R,sha256=phXpEV3DE0Vxp6AKB9yG188paqj8ak1Mhyf9WJ_1x84,2225
circtools/scripts/circtools_reconstruct_visualization.R,sha256=ODqbKgm3KMJZsRfA2oxjgfzg6ae_lJVLHY3owJwxUwU,12125
circtools/scripts/circtools_sirna_formatter.R,sha256=hvzZNMMYVK7FGmRy1odIctHPwIuwyfI8p9Pe0AQK2-c,10905
circtools/scripts/create_igv_script.py,sha256=qzrYvIdTnSIrTogl-iA1oHLxOhkdiHt9rHHwDj4XqZA,8784
circtools/scripts/create_igv_script_from_gene_names.py,sha256=zADKPfAcOVuFAQHxb290duQ6EZsxUWAC0x1ql_BxTXc,6813
circtools/scripts/create_igv_script_from_position_list.py,sha256=d9Y8F88mV62OBaLGxrIenOISoaR-GtVUM01DPeu2m9E,7098
circtools/scripts/detect_new_exons_from_fuchs_data.py,sha256=vC2HGfCSbvH2cZbcyjGtA-XtQz-4xFg0n35qIifEQNg,11775
circtools/scripts/install_R_dependencies.R,sha256=Uos8Ih9MquLlBG-rb1gNb5tY_wj2cMN0sbLXeRhTXF4,3161
circtools/scripts/install_add_to_bashrc.sh,sha256=dJVXQ9ERWI5CCqRgwy10IJJi7MmR-wMVrx7mlnvpUew,1066
circtools/scripts/install_create_r_environ.sh,sha256=FD5KDdI9N34otnqQtTFzXzAajFcfp8YjDPjUbyjkobo,922
circtools/scripts/install_external.sh,sha256=RHecVljkPeWU3eppnNcqKM9PlgHaRyBVIme4CrFBGFA,1451
circtools/scripts/r_runner.py,sha256=5SAw--R9uDiPPfhuTrNzPE3Kezc9NLsjcKNJHDAboUI,2907
circtools/scripts/slurm_CIRIquant.sh,sha256=7hmTi-Py4qvHQeRLVZKr9kd52TkE8Ahj-jkucLTjy_4,832
circtools/scripts/slurm_bowtie2_rRNA_filter_paired.sh,sha256=WSfpSRB4F836i0Wdq1MnBEpOtegAp3qoPIj2bGvlMuk,1269
circtools/scripts/slurm_circtools_detect_paired_mapping.sh,sha256=S7YCIU5nvxJLgih-AX_qyFggI6J2p-MbRVyYZ08ot8U,7988
circtools/scripts/slurm_circtools_enrich_intron.sh,sha256=Dqk99nFAAtWVKQ02Fji7qltTuMv-LYezfcpYrP5E53o,609
circtools/scripts/slurm_circtools_reconstruct.sh,sha256=6wviRhR4h_Opon7QCwcwqIDkiG1H0iXZt_qSOozE16s,1412
circtools/scripts/slurm_flexbar_paired.sh,sha256=Wbb2x_R3BApTwJit0vp8tAgUfA9G4sZ6e378HdvHiYA,1241
circtools/scripts/slurm_prep_circtools.sh,sha256=WnbXzARdmu-yoyByY3hD4QxnpX7coPcvAZqgZT5V1AE,1461
circtools/scripts/slurm_stringtie.sh,sha256=jteph8h31rS9vxu8M55Z_ucPim3IkE_rFz7wi8_KAj0,1517
circtools/scripts/wonderdump,sha256=XaTc37RwZxkkrHj-5NIoBRaSwkSu1u8cpbFWo429Hkw,1203
circtools/sirna/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
circtools/sirna/sirna.py,sha256=vbxQq48bZUPTKg01_HOOX3awLclBTg7zimON0Lx4pyw,40141
circtools-2.0.2.dist-info/LICENSE,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
circtools-2.0.2.dist-info/METADATA,sha256=49H0zaUjJAZ-VSzxIadu-BP5Bn4jqJL9fdgsz4Eokjw,13703
circtools-2.0.2.dist-info/WHEEL,sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo,92
circtools-2.0.2.dist-info/entry_points.txt,sha256=49j0CcUneNDTYxHAzyojOwnhpZTu5eopf7i7xD3Ohb0,2044
circtools-2.0.2.dist-info/top_level.txt,sha256=C9ruac7vuZNdnntjlcb9n3kDcp_zJGwgqS8A8NXPqic,10
circtools-2.0.2.dist-info/RECORD,,
