Metadata-Version: 1.2
Name: SpliceV
Version: 0.1.6.10
Summary: Visualize splice junctions, backsplice junctions (circleRNA) and coverage from RNA-Seq datasets
Home-page: https://github.com/flemingtonlab/SpliceV
Author: Nathan Ungerleider
Author-email: nungerle@tulane.edu
License: UNKNOWN
Description: # SpliceV #
        Visualize coverage, canonical, and backsplice junctions.
        
        ![Example plot](https://github.com/flemingtonlab/SpliceV/blob/master/etc/example.png)
        
        ## Requirements ##
        SpliceV works with Python 2.7 and 3.0+.
        ## Dependencies ##
        * Matplotlib
        * Numpy
        * pysam
        ## Installation ##
        To install SpliceV:
        
        ```
        pip install SpliceV
        ```
        
        Or:
        
        ```
        git clone https://github.com/flemingtonlab/SpliceV.git
        ```
        
        ## Example ##
        To run the example dataset:
        
        ```
        git clone https://github.com/flemingtonlab/SpliceV.git 
        
        cd SpliceV/example 
        
        python ../bin/SpliceV -b example.bam -gtf uba2.gtf -g UBA2 -f 5
        
        ```
        
        ## Authors ##
        Created by Nathan Ungerleider and Erik Flemington
        
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Requires-Python: >=2.7,>=3
