Metadata-Version: 2.1
Name: bioscrape
Version: 1.1.0
Summary: Biological Stochastic Simulation of Single Cell Reactions and Parameter Estimation.
Home-page: https://github.com/biocircuits/bioscrape/
Author: Anandh Swaminathan, William Poole, Ayush Pandey
License: UNKNOWN
Project-URL: Documentation, https://readthedocs.org/projects/biocrnpyler/
Project-URL: Funding, http://www.cds.caltech.edu/~murray/wiki/DARPA_BioCon
Project-URL: Source, https://github.com/biocircuits/bioscrape/
Project-URL: Tracker, https://github.com/biocircuits/bioscrape/issues
Keywords: SBML synthetic biology modeling Chemical Reaction Network CRN simulator stochastic parameter inference
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Software Development
Classifier: Topic :: Scientific/Engineering
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: matplotlib
Requires-Dist: pytest
Requires-Dist: scipy
Requires-Dist: cython
Requires-Dist: python-libsbml
Requires-Dist: beautifulsoup4
Requires-Dist: sympy
Requires-Dist: emcee
Requires-Dist: pandas

bioscrape - Biological Stochastic Simulation of Single Cell Reactions and Parameter Estimation
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|Build Status|

Bioscrape is a Chemical Reaction Network Simulator written in cython for speed and python compatability. It can be used for deterministic, stochastic, or single cell simulation and also has parameter inference capabilities.

To install Bioscrape, in your terminal run the command:
   
   pip install bioscrape

Please note that Bioscrape is a cython extension module and requires a C++ compiler to be set up on your computer for installation. For more information, please visit https://github.com/biocircuits/bioscrape/wiki.

.. |Build Status| image:: https://github.com/biocircuits/bioscrape/actions/workflows/bioscrape.yml/badge.svg
   :target: https://github.com/biocircuits/bioscrape


