Metadata-Version: 2.1
Name: isoviz
Version: 0.0.3
Summary: This package visualizes isoform structure and expression.
Home-page: https://github.com/kolikem/isoviz
Author: Ko Ikemoto
Author-email: imko@m.u-tokyo.ac.jp
Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: matplotlib>=3.5
Requires-Dist: pandas>=1.3
Requires-Dist: numpy>=1.21

# isoformvisualizer

This package visualizes isoform structure and expression.

## Installation

```shell
$ pip install isoviz
```

## Example

```shell
$ cd test_sample
$ isoviz -gene AGMO -annot AGMO_annotated.gft -unannot AGMO_novel.gtf -exp expression.tsv.imk.comp.PASS.FILT.count.tx.count.CPM -det edgeRresult_for_isoformvisualizer.reordered.csv -meta metadata.tsv
```

