Metadata-Version: 2.1
Name: neuron-morphology
Version: 1.1.7
Summary: Tools for working with single-neuron morphological reconstructions
Author: Allen Institute for Brain Science
Author-email: Marmot@AllenInstitute.onmicrosoft.com
Keywords: neuroscience,bioinformatics,scientific
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: Other/Proprietary License
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3.8
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: matplotlib
Requires-Dist: pillow
Requires-Dist: pandas
Requires-Dist: numpy (>=1.14.2)
Requires-Dist: scipy (>=1.0.0)
Requires-Dist: six
Requires-Dist: allensdk
Requires-Dist: argschema
Requires-Dist: glymur (<1.0.0)
Requires-Dist: shapely (<2.0.0)
Requires-Dist: imageio (<3.0.0)
Requires-Dist: pg8000 (<2.0.0)
Requires-Dist: boto3 (>=1.12.42)
Requires-Dist: cloud-files
Requires-Dist: scikit-image (>0.17)
Requires-Dist: tables (>=3.8)
Provides-Extra: streamlines
Requires-Dist: fenics-dolfinx ; extra == 'streamlines'
Requires-Dist: python-gmsh ; extra == 'streamlines'
Requires-Dist: rasterio ; extra == 'streamlines'

[![Documentation Status](https://readthedocs.org/projects/neuron-morphology/badge/?version=latest)](https://neuron-morphology.readthedocs.io/en/latest/?badge=latest) [![Allen Institute](https://circleci.com/gh/AllenInstitute/neuron_morphology.svg?style=svg)](https://app.circleci.com/pipelines/github/AllenInstitute/neuron_morphology) [![Build status](https://ci.appveyor.com/api/projects/status/7fekclwnq58p61ax?svg=true)](https://ci.appveyor.com/project/fcollman/neuron-morphology)


neuron_morphology
=================

A package for working with single-neuron morphological reconstruction data, such as those in the [Allen Cell Types Database](https://celltypes.brain-map.org/). Provides tools for processing, visualizing, and analyzing such reconstructions.

For usage and installation instructions, see the [documentation](https://neuron-morphology.readthedocs.io/en/latest/).

Contributing
------------
We welcome contributions! Please see our [contribution guide](CONTRIBUTING.md) for more information. Thank you!

Level of Support
----------------
We are planning on occasional updating this tool with no fixed schedule. Community involvement is encouraged through both issues and pull requests.

