All functions
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addSeq
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Return sequences for the exon pairs |
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bcl6exons
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Exon structure of BCL6 transcripts |
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design
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Run primer design |
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diagnose
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Returns diagnostics information from the run |
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extractExonPairs
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Get exon pairs |
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p3Settings
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Get/define Primer3 settings |
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p3Version
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Get Primer3 version |
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plotSegments
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Plot exon structure |
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primerSize
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Set primer size |
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primersToList
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Split primers GRanges into a list by their direction |
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primerTm
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Set ptimer melting temperatures |
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productSize
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Set product size |
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runPrimer3
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Invokes Primer3 for a given list of options |
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selectPairs
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Given a list of exons returns candidates for primer design |
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seqSettings
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A helper to define template parameters |
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toGRanges
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Transforms output of design to GRanges |