Metadata-Version: 2.4
Name: ficture
Version: 0.0.5.3
Summary: Segmentation free factor analysis for sub-micron resolution spatial transcriptomics
Author-email: Yichen Si <ycsi@umich.edu>
License: CC BY-NC 4.0
Project-URL: Homepage, https://seqscope.github.io/ficture/
Project-URL: Bug Tracker, https://github.com/seqscope/ficture/issues
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: scipy
Requires-Dist: scikit-learn
Requires-Dist: joblib
Requires-Dist: matplotlib
Requires-Dist: Pillow
Requires-Dist: Jinja2
Requires-Dist: opencv-python
Requires-Dist: shapely
Requires-Dist: geojson
Requires-Dist: geopandas
Requires-Dist: ete3
Requires-Dist: PyQt5
Dynamic: license-file

# FICTURE

FICTURE: Scalable segmentation-free analysis of sub-micron resolution spatial transcriptomics

Install 
```
pip install ficture
```

Documentation [https://seqscope.github.io/ficture/](https://seqscope.github.io/ficture/)

[Preprint](https://biorxiv.org/cgi/content/short/2023.11.04.565621v2) (Real data results in the preprint are [available on Zenodo](https://zenodo.org/records/10070621))

For a brief introduction, see [slides used for AGBT talk](http://tinyurl.com/47pbktzp)
