requests>=2.31.0
numpy>=1.24.0
scipy>=1.11.0
networkx>=3.1
plotly>=5.16.0
scikit-learn>=1.3.0
flask>=2.3.0
biopython>=1.81
pandas>=2.0.3
pyarrow>=12.0.0
matplotlib>=3.7.0
seaborn>=0.12.0
tqdm>=4.66.0
joblib>=1.3.0
flask-cors>=4.0.0
flask-caching>=2.0.0
python-dotenv>=1.0.0
werkzeug>=2.3.0
jinja2>=3.1.0
pyyaml>=6.0.0
typing-extensions>=4.7.0

[database]
pymysql>=1.1.0
sqlalchemy>=2.0.0

[dev]
pytest>=7.4.0
pytest-cov>=4.1.0
flake8>=6.1.0
black>=23.7.0
pre-commit>=3.3.0
