LICENSE
MANIFEST.in
README.md
setup.py
spit/__init__.py
spit/cluster_samples.py
spit/confounding_analysis.py
spit/dtu_detection.py
spit/filter_and_transform_tx_counts.py
spit/get_p_cutoff.py
spit/import_infreps.py
spit/plot_spit_charts.py
spit/run_spit.py
spit/spit_test.py
spit/transform_tx_counts_to_ifs.py
spit.egg-info/PKG-INFO
spit.egg-info/SOURCES.txt
spit.egg-info/dependency_links.txt
spit.egg-info/entry_points.txt
spit.egg-info/requires.txt
spit.egg-info/top_level.txt
spit/parameter_fitting/LOOCV.py
spit/parameter_fitting/__init__.py
spit/parameter_fitting/filter_and_simulate_tx_counts.py
spit/parameter_fitting/simulate_dtu_exp.py
spit/r_scripts/hclust.R
spit/r_scripts/tximport_quant_files.R